Last updated on 2025-09-29 08:49:34 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 11.83 | 250.77 | 262.60 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.46 | 268.17 | 278.63 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 355.03 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.43 | 272.92 | 286.35 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.01 | 267.16 | 282.17 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 358.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 326.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 231.00 | 255.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [90s/252s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.672, system: 0.108, elapsed: 5.073 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.372, system: 0.368, elapsed: 28.891 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.031, elapsed: 0.719 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.131, system: 0.397, elapsed: 19.197 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.013, elapsed: 0.432 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.281, system: 1.375, elapsed: 57.903 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.595, system: 0.087, elapsed: 3.345 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.321, system: 0.384, elapsed: 22.563 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.027, elapsed: 0.398 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.062, system: 0.365, elapsed: 10.572 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.009, elapsed: 0.250 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.945, system: 0.984, elapsed: 38.635 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.713, system: 0.096, elapsed: 3.129 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.497, system: 0.392, elapsed: 24.598 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.027, elapsed: 0.592 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.300, system: 0.560, elapsed: 15.647 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.011, elapsed: 0.572 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.341, system: 0.412, elapsed: 5.040 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.021, system: 1.833, elapsed: 52.636 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.679, system: 0.096, elapsed: 5.098 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.585, system: 0.378, elapsed: 38.975 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.036, elapsed: 1.152 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.197, system: 0.412, elapsed: 15.511 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.010, elapsed: 0.548 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.773, system: 0.663, elapsed: 22.576 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.404, system: 2.012, elapsed: 87.832 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [89s/221s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.855, system: 0.130, elapsed: 4.275 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.516, system: 0.490, elapsed: 27.482 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.031, elapsed: 0.560 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.080, system: 0.508, elapsed: 11.926 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.025, elapsed: 0.407 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.540, system: 1.624, elapsed: 47.290 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.886, system: 0.144, elapsed: 3.839 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.471, system: 0.411, elapsed: 31.224 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.031, elapsed: 0.568 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.925, system: 0.379, elapsed: 10.963 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.011, elapsed: 0.562 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.315, system: 1.306, elapsed: 49.615 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.666, system: 0.084, elapsed: 4.736 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.358, system: 0.285, elapsed: 21.692 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.027, elapsed: 0.447 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.776, system: 0.301, elapsed: 8.023 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.023, elapsed: 0.608 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.199, system: 0.417, elapsed: 2.717 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.141, system: 1.545, elapsed: 41.062 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.519, system: 0.046, elapsed: 3.201 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.315, system: 0.276, elapsed: 22.209 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.028, elapsed: 0.462 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.770, system: 0.300, elapsed: 9.070 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.012, elapsed: 0.422 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.909, system: 1.123, elapsed: 30.942 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.676, system: 2.142, elapsed: 68.931 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64