Last updated on 2025-07-20 08:49:41 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.44 | 249.54 | 262.98 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.65 | 221.74 | 232.39 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.66 | 250.48 | 264.14 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 175.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 155.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 234.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.490, system: 0.046, elapsed: 1.933 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.892, system: 0.114, elapsed: 11.293 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.014, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.747, system: 0.207, elapsed: 5.031 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.214 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.005, system: 0.407, elapsed: 19.411 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.528, system: 0.048, elapsed: 2.362 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.937, system: 0.093, elapsed: 12.812 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.237 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.760, system: 0.170, elapsed: 6.359 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.259 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.115, system: 0.352, elapsed: 22.853 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.515, system: 0.033, elapsed: 2.723 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.982, system: 0.086, elapsed: 14.897 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.290 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.753, system: 0.189, elapsed: 7.342 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.440 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.150, system: 0.210, elapsed: 1.870 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.368, system: 0.556, elapsed: 28.943 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.426, system: 0.031, elapsed: 3.904 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.950, system: 0.063, elapsed: 20.343 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.292 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.788, system: 0.176, elapsed: 6.714 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.290 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.142, system: 0.442, elapsed: 14.451 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.300, system: 0.761, elapsed: 47.328 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/106s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.484, system: 0.038, elapsed: 1.763 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.009, system: 0.085, elapsed: 10.961 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.015, elapsed: 0.238 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.395, system: 0.171, elapsed: 3.631 seconds]
Computing values for grid cells...
... done. [user: 0.151, system: 0.002, elapsed: 0.155 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.752, system: 0.332, elapsed: 17.372 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.433, system: 0.030, elapsed: 1.584 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.977, system: 0.066, elapsed: 14.708 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.338 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.603, system: 0.163, elapsed: 5.964 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.004, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.889, system: 0.301, elapsed: 23.638 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.514, system: 0.032, elapsed: 2.772 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.980, system: 0.050, elapsed: 14.706 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.011, elapsed: 0.283 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.465, system: 0.160, elapsed: 5.279 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.005, elapsed: 0.247 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.052, system: 0.216, elapsed: 0.918 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.005, system: 0.516, elapsed: 25.291 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.452, system: 0.027, elapsed: 2.062 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.904, system: 0.049, elapsed: 12.650 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.266 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.500, system: 0.171, elapsed: 5.284 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.008, elapsed: 0.215 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.845, system: 0.562, elapsed: 12.977 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.674, system: 0.857, elapsed: 34.409 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64